AT3G26060.1
0.90457299999999996043
<html><body><title>AT3G26060.1</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u322606001000i/AT3G26060.1.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u322606001000i/AT3G26060.1.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u322606001000i/AT3G26060.1.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u125223001000i">AT1G52230.1</a></td><td>0.954158</td><td>PSAH2 (PHOTOSYSTEM I SUBUNIT H2)</td><td>OMAT1P014370</td><td>-</td><td>OMAT1P112780</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u322105501000i">AT3G21055.1</a></td><td>0.953321</td><td>PSBTN (photosystem II subunit T)</td><td>OMAT3P106900</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420253001000i">AT4G02530.1</a></td><td>0.944946</td><td>chloroplast thylakoid lumen protein</td><td>OMAT4P100910</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u123038001000i">AT1G30380.1</a></td><td>0.935262</td><td>PSAK (photosystem I subunit K)</td><td>OMAT1P010630</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u125222001000i">AT1G52220.1</a></td><td>0.932501</td><td>FUNCTIONS IN: molecular_function unknown</td><td>OMAT1P112780</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u124457501000i">AT1G44575.1</a></td><td>0.931642</td><td>NPQ4 (NONPHOTOCHEMICAL QUENCHING)</td><td>OMAT1P012640</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u123208001000i">AT1G32080.1</a></td><td>0.931601</td><td>membrane protein, putative</td><td>OMAT1P110110</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u121582001000i">AT1G15820.1</a></td><td>0.929671</td><td>LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)</td><td>OMAT1P105300</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u525463001000i">AT5G54630.1</a></td><td>0.928421</td><td>zinc finger protein-related</td><td>OMAT5P114210</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u423259003000i">AT4G32590.3</a></td><td>0.92164</td><td>ferredoxin-related</td><td>OMAT4P010910</td><td>-</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u125391001000i">AT1G53910.1</a></td><td>-0.937985</td><td>RAP2.12</td><td>OMAT1P014940</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u522660002000i">AT5G26600.2</a></td><td>-0.903949</td><td>catalytic/ pyridoxal phosphate binding</td><td>OMAT5P009080</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u326300001000i">AT3G63000.1</a></td><td>-0.890825</td><td>NPL41 (NPL4-LIKE PROTEIN 1)</td><td>OMAT3P018000</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u222209002000i">AT2G22090.2</a></td><td>-0.889589</td><td>UBP1 interacting protein 1a (UBA1a)</td><td>OMAT2P103710</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420257001000i">AT4G02570.1</a></td><td>-0.883744</td><td>ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)</td><td>OMAT4P000970</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u223711001000i">AT2G37110.1</a></td><td>-0.86803</td><td>unknown protein</td><td>OMAT2P009530</td><td>-</td><td>OMAT2P108630</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u524993001000i">AT5G49930.1</a></td><td>-0.861925</td><td>emb1441 (embryo defective 1441)</td><td>OMAT5P112810</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u321788001000i">AT3G17880.1</a></td><td>-0.858738</td><td>ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN)</td><td>OMAT3P006760</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u126104001000i">AT1G61040.1</a></td><td>-0.854562</td><td>VIP5 (vernalization independence 5)</td><td>OMAT1P016560</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u320177001000i">AT3G01770.1</a></td><td>-0.852701</td><td>ATBET10 (Arabidopsis thaliana BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 10)</td><td>OMAT3P100390</td><td>-</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u322606001000i/AT3G26060.1-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 6.22e-91</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>6.22e-91 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0015979</td><td>photosynthesis</td><td>44/200</td><td>55.01</td><td>2.50e-67</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006091</td><td>generation of precursor metabolites and energy</td><td>26/200</td><td>16.25</td><td>3.65e-25</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044237</td><td>cellular metabolic process</td><td>100/200</td><td>2.12</td><td>1.30e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009628</td><td>response to abiotic stimulus</td><td>35/200</td><td>4.72</td><td>3.38e-15</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0042742</td><td>defense response to bacterium</td><td>16/200</td><td>13.44</td><td>5.24e-15</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0055114</td><td>oxidation reduction</td><td>15/200</td><td>15.02</td><td>5.46e-15</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0009416</td><td>response to light stimulus</td><td>22/200</td><td>7.65</td><td>2.08e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009314</td><td>response to radiation</td><td>22/200</td><td>7.40</td><td>4.16e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009617</td><td>response to bacterium</td><td>16/200</td><td>10.35</td><td>3.83e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009409</td><td>response to cold</td><td>15/200</td><td>9.63</td><td>5.44e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0005996</td><td>monosaccharide metabolic process</td><td>12/200</td><td>13.04</td><td>1.04e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0051186</td><td>cofactor metabolic process</td><td>14/200</td><td>9.42</td><td>3.26e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0042440</td><td>pigment metabolic process</td><td>10/200</td><td>14.09</td><td>1.54e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0051188</td><td>cofactor biosynthetic process</td><td>11/200</td><td>11.72</td><td>2.12e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0051707</td><td>response to other organism</td><td>19/200</td><td>5.67</td><td>2.13e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009607</td><td>response to biotic stimulus</td><td>19/200</td><td>5.26</td><td>7.96e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0018130</td><td>heterocycle biosynthetic process</td><td>10/200</td><td>11.71</td><td>1.13e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009266</td><td>response to temperature stimulus</td><td>15/200</td><td>6.58</td><td>1.49e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006066</td><td>alcohol metabolic process</td><td>12/200</td><td>7.70</td><td>6.97e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006952</td><td>defense response</td><td>18/200</td><td>3.95</td><td>1.87e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044282</td><td>small molecule catabolic process</td><td>10/200</td><td>6.76</td><td>3.30e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044262</td><td>cellular carbohydrate metabolic process</td><td>14/200</td><td>4.53</td><td>6.00e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0046483</td><td>heterocycle metabolic process</td><td>13/200</td><td>4.80</td><td>6.78e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0006950</td><td>response to stress</td><td>31/200</td><td>2.50</td><td>7.83e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044281</td><td>small molecule metabolic process</td><td>25/200</td><td>2.78</td><td>1.22e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0044271</td><td>cellular nitrogen compound biosynthetic process</td><td>12/200</td><td>4.53</td><td>3.01e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0005975</td><td>carbohydrate metabolic process</td><td>15/200</td><td>2.88</td><td>7.70e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0044255</td><td>cellular lipid metabolic process</td><td>10/200</td><td>3.72</td><td>9.16e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009056</td><td>catabolic process</td><td>12/200</td><td>2.52</td><td>1.10e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0043436</td><td>oxoacid metabolic process</td><td>11/200</td><td>2.50</td><td>1.69e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006082</td><td>organic acid metabolic process</td><td>11/200</td><td>2.49</td><td>1.73e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0042180</td><td>cellular ketone metabolic process</td><td>11/200</td><td>2.45</td><td>1.98e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006629</td><td>lipid metabolic process</td><td>10/200</td><td>2.30</td><td>4.58e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009058</td><td>biosynthetic process</td><td>42/200</td><td>1.44</td><td>5.08e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0044249</td><td>cellular biosynthetic process</td><td>40/200</td><td>1.42</td><td>7.89e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0044435</td><td>plastid part</td><td>148/200</td><td>26.01</td><td>1.08e-188</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0044434</td><td>chloroplast part</td><td>147/200</td><td>26.54</td><td>1.75e-188</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0009536</td><td>plastid</td><td>180/200</td><td>9.75</td><td>1.27e-164</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G26060&keyword=plastid">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0009579</td><td>thylakoid</td><td>110/200</td><td>44.18</td><td>4.53e-161</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0044436</td><td>thylakoid part</td><td>95/200</td><td>46.05</td><td>3.18e-139</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0031976</td><td>plastid thylakoid</td><td>93/200</td><td>46.72</td><td>9.40e-137</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0031984</td><td>organelle subcompartment</td><td>93/200</td><td>46.44</td><td>1.82e-136</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0055035</td><td>plastid thylakoid membrane</td><td>86/200</td><td>49.65</td><td>1.71e-128</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0034357</td><td>photosynthetic membrane</td><td>87/200</td><td>47.43</td><td>5.00e-128</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044446</td><td>intracellular organelle part</td><td>148/200</td><td>10.32</td><td>1.38e-126</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0042651</td><td>thylakoid membrane</td><td>86/200</td><td>47.51</td><td>1.54e-126</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044422</td><td>organelle part</td><td>148/200</td><td>10.31</td><td>1.57e-126</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0044444</td><td>cytoplasmic part</td><td>184/200</td><td>5.30</td><td>1.68e-121</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0005737</td><td>cytoplasm</td><td>184/200</td><td>4.91</td><td>1.85e-115</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>183/200</td><td>4.17</td><td>4.45e-101</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>183/200</td><td>4.16</td><td>4.56e-101</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>183/200</td><td>3.96</td><td>3.87e-97</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044424</td><td>intracellular part</td><td>184/200</td><td>3.61</td><td>6.22e-91</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0005622</td><td>intracellular</td><td>185/200</td><td>3.48</td><td>4.75e-89</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0009526</td><td>plastid envelope</td><td>71/200</td><td>25.83</td><td>1.95e-82</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0009532</td><td>plastid stroma</td><td>63/200</td><td>25.49</td><td>1.91e-72</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0031967</td><td>organelle envelope</td><td>71/200</td><td>17.04</td><td>6.59e-69</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0031975</td><td>envelope</td><td>71/200</td><td>17.04</td><td>6.59e-69</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>193/200</td><td>2.11</td><td>1.49e-57</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0016020</td><td>membrane</td><td>107/200</td><td>3.91</td><td>1.75e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0048046</td><td>apoplast</td><td>32/200</td><td>16.22</td><td>1.73e-30</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043234</td><td>protein complex</td><td>44/200</td><td>6.72</td><td>6.50e-25</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044425</td><td>membrane part</td><td>30/200</td><td>3.79</td><td>8.22e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005840</td><td>ribosome</td><td>16/200</td><td>6.25</td><td>1.06e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0030529</td><td>ribonucleoprotein complex</td><td>16/200</td><td>4.59</td><td>9.77e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0022626</td><td>cytosolic ribosome</td><td>10/200</td><td>5.43</td><td>2.78e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043228</td><td>non-membrane-bounded organelle</td><td>17/200</td><td>2.85</td><td>3.39e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0043232</td><td>intracellular non-membrane-bounded organelle</td><td>17/200</td><td>2.85</td><td>3.39e-05</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0046906</td><td>tetrapyrrole binding</td><td>12/200</td><td>6.29</td><td>7.54e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0016829</td><td>lyase activity</td><td>12/200</td><td>6.20</td><td>9.03e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0016491</td><td>oxidoreductase activity</td><td>21/200</td><td>2.49</td><td>4.13e-05</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>193/200</td><td>2.54</td><td>7.98e-73</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>190/200</td><td>2.59</td><td>6.01e-71</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>192/200</td><td>2.39</td><td>1.06e-66</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>193/200</td><td>2.34</td><td>3.35e-66</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>185/200</td><td>2.39</td><td>8.94e-60</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>190/200</td><td>2.25</td><td>1.10e-59</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>184/200</td><td>2.37</td><td>4.95e-58</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>193/200</td><td>2.10</td><td>3.88e-57</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G26060&keyword=leaf">1.24E-18</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>190/200</td><td>2.17</td><td>1.31e-56</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>190/200</td><td>2.15</td><td>4.89e-56</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>185/200</td><td>2.21</td><td>2.00e-53</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>186/200</td><td>2.16</td><td>1.06e-52</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>182/200</td><td>2.24</td><td>4.24e-52</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>189/200</td><td>2.05</td><td>4.91e-51</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>190/200</td><td>1.97</td><td>8.62e-49</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>181/200</td><td>2.16</td><td>1.53e-48</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>193/200</td><td>1.88</td><td>3.69e-48</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>185/200</td><td>2.06</td><td>5.37e-48</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>190/200</td><td>1.94</td><td>8.46e-48</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>190/200</td><td>1.93</td><td>2.20e-47</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>190/200</td><td>1.93</td><td>2.20e-47</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>185/200</td><td>1.96</td><td>1.89e-44</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>185/200</td><td>1.96</td><td>1.89e-44</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>193/200</td><td>1.78</td><td>1.72e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000293</td><td>guard cell</td><td>74/200</td><td>6.88</td><td>3.49e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000351</td><td>guard mother cell</td><td>74/200</td><td>6.85</td><td>4.76e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0000070</td><td>meristemoid</td><td>74/200</td><td>6.84</td><td>5.35e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>190/200</td><td>1.83</td><td>6.55e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>190/200</td><td>1.82</td><td>1.95e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0006016</td><td>leaf epidermis</td><td>74/200</td><td>6.65</td><td>3.45e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0006035</td><td>shoot epidermis</td><td>74/200</td><td>6.61</td><td>5.60e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000349</td><td>epidermal initial</td><td>74/200</td><td>6.56</td><td>9.07e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0004011</td><td>initial cell</td><td>74/200</td><td>6.52</td><td>1.41e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0004010</td><td>meristematic cell</td><td>74/200</td><td>6.51</td><td>1.57e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0004013</td><td>epidermal cell</td><td>75/200</td><td>6.29</td><td>4.32e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0005679</td><td>epidermis</td><td>75/200</td><td>6.06</td><td>5.90e-40</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009014</td><td>dermal tissue</td><td>75/200</td><td>6.05</td><td>6.10e-40</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>166/200</td><td>2.00</td><td>1.37e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0000034</td><td>vascular system</td><td>11/200</td><td>3.37</td><td>1.21e-04</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>185/200</td><td>2.41</td><td>4.09e-60</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>185/200</td><td>2.40</td><td>4.52e-60</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>183/200</td><td>2.30</td><td>5.75e-55</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>184/200</td><td>2.24</td><td>7.66e-54</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>185/200</td><td>2.20</td><td>3.50e-53</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>185/200</td><td>2.20</td><td>3.64e-53</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>185/200</td><td>2.18</td><td>1.22e-52</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>183/200</td><td>2.22</td><td>2.54e-52</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>183/200</td><td>2.20</td><td>9.61e-52</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>184/200</td><td>2.04</td><td>9.07e-47</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>184/200</td><td>2.03</td><td>1.93e-46</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>185/200</td><td>1.91</td><td>2.47e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>185/200</td><td>1.87</td><td>5.52e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>186/200</td><td>1.83</td><td>9.92e-40</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>186/200</td><td>1.78</td><td>1.23e-37</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>chloroplast</td><td>-</td><td>149/200</td><td>8.44</td><td>1.35e-114</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G26060&keyword=chloroplast">5.00E-15</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>thylakoid</td><td>-</td><td>76/200</td><td>35.70</td><td>2.86e-100</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>photosystem</td><td>-</td><td>40/200</td><td>66.51</td><td>1.68e-65</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>components</td><td>-</td><td>50/200</td><td>30.79</td><td>8.20e-62</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>stroma</td><td>-</td><td>35/200</td><td>18.77</td><td>1.68e-35</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>envelope</td><td>-</td><td>35/200</td><td>15.31</td><td>2.74e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>light</td><td>-</td><td>33/200</td><td>12.36</td><td>2.06e-27</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>subunit</td><td>-</td><td>42/200</td><td>5.73</td><td>3.87e-21</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>membrane</td><td>-</td><td>71/200</td><td>2.67</td><td>3.48e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>response</td><td>-</td><td>57/200</td><td>3.18</td><td>3.50e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>encodes</td><td>-</td><td>65/200</td><td>2.55</td><td>9.22e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>complex</td><td>-</td><td>34/200</td><td>4.02</td><td>9.34e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>plastid</td><td>-</td><td>15/200</td><td>9.94</td><td>3.38e-12</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G26060&keyword=plastid">3.64E-21</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>bacterium</td><td>-</td><td>12/200</td><td>12.63</td><td>1.57e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>catalytic</td><td>-</td><td>33/200</td><td>3.25</td><td>5.85e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>apoplast</td><td>-</td><td>12/200</td><td>7.15</td><td>1.69e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr016040</td><td>-</td><td>13/200</td><td>6.04</td><td>4.24e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>electron</td><td>-</td><td>16/200</td><td>4.49</td><td>1.31e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>dehydrogenase</td><td>-</td><td>14/200</td><td>4.83</td><td>2.67e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>reductase</td><td>-</td><td>13/200</td><td>4.77</td><td>7.34e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>defense</td><td>-</td><td>14/200</td><td>4.01</td><td>2.66e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>enzyme</td><td>-</td><td>13/200</td><td>3.85</td><td>8.65e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>biosynthetic</td><td>-</td><td>20/200</td><td>2.80</td><td>1.10e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>phosphate</td><td>-</td><td>12/200</td><td>3.96</td><td>1.29e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>cysteine</td><td>-</td><td>10/200</td><td>4.54</td><td>1.50e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G26060&keyword=cysteine">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>pathway</td><td>-</td><td>11/200</td><td>4.09</td><td>1.89e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>process</td><td>-</td><td>39/200</td><td>1.90</td><td>2.76e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ribosomal</td><td>-</td><td>11/200</td><td>3.64</td><td>5.80e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>structural</td><td>-</td><td>11/200</td><td>3.14</td><td>2.33e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>chain</td><td>-</td><td>10/200</td><td>3.31</td><td>2.55e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>stimulus</td><td>-</td><td>12/200</td><td>2.79</td><td>4.29e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>stress</td><td>-</td><td>11/200</td><td>2.34</td><td>2.84e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>oxidoreductase</td><td>-</td><td>10/200</td><td>2.15</td><td>7.56e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
with_OMAT_gene